STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114448031C-reactive protein-like. (233 aa)    
Predicted Functional Partners:
APOH
Beta-2-glycoprotein 1-like.
   
 
 0.611
APOH-2
Beta-2-glycoprotein 1-like.
   
 
 0.611
LOC114431597
Apolipoprotein Eb-like.
     
 0.591
serpinc1
Serpin family C member 1.
   
  
 0.557
c9
Complement C9.
   
  
 0.545
C1QC
Complement C1q subcomponent subunit C-like.
   
 
 0.532
serpind1
Serpin family D member 1.
   
  
 0.530
plg
Plasminogen.
   
 
 0.502
LOC114444250
Collagen type IV alpha-3-binding protein-like.
    
 
 0.469
CERT1
Collagen type IV alpha-3-binding protein-like.
    
 
 0.469
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.