STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114448952Small conductance calcium-activated potassium channel protein 1-like. (701 aa)    
Predicted Functional Partners:
KCNMB4
Potassium calcium-activated channel subfamily M regulatory beta subunit 4.
     
 0.717
lipt2
Lipoyl(octanoyl) transferase 2.
     
 0.706
LOC114449826
Calcium-activated potassium channel subunit beta-2-like.
     
 0.700
LOC114449682
Calcium-activated potassium channel subunit beta-3-like.
     
 0.652
LOC114443555
Potassium channel subfamily T member 2-like.
     
 0.598
LOC114441312
Potassium channel subfamily T member 1-like.
     
 0.598
LOC114446838
Calcium-activated potassium channel subunit alpha-1-like.
     
 0.598
LOC114451567
Calcium-activated potassium channel subunit alpha-1-like.
     
 0.598
LOC114441085
Potassium voltage-gated channel subfamily V member 2-like.
   
 
 0.569
LOC114444057
Potassium voltage-gated channel subfamily V member 2-like.
   
 
 0.564
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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