STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc1a4Solute carrier family 1 member 4. (529 aa)    
Predicted Functional Partners:
aldh7a1
Aldehyde dehydrogenase 7 family member A1.
  
 
 0.631
rhoq
Ras homolog family member Q.
    
 0.611
ENSPRNP00000031141
Ras homolog family member H.
    
 0.611
upb1
Beta-ureidopropionase 1.
    
 0.599
abat
4-aminobutyrate aminotransferase.
  
 
 0.591
agxt2
Alanine--glyoxylate aminotransferase 2.
  
 
 0.590
aldh4a1
Aldehyde dehydrogenase 4 family member A1.
  
 
 0.590
mtr
5-methyltetrahydrofolate-homocysteine methyltransferase.
    
 0.586
tmem59
Transmembrane protein 59.
   
  0.584
glyctk
Glycerate kinase.
    
  0.567
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.