STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114442490Sodium/potassium/calcium exchanger 3-like. (595 aa)    
Predicted Functional Partners:
get4
Guided entry of tail-anchored proteins factor 4.
    
   0.707
RAD23B
RAD23 homolog B, nucleotide excision repair protein.
    
   0.577
LOC114434054
UV excision repair protein RAD23 homolog B-like.
    
   0.577
rad23a
RAD23 homolog A, nucleotide excision repair protein.
    
   0.577
LOC114450975
Sodium/calcium exchanger 1-like.
   
 
0.564
LOC114445872
Sodium/calcium exchanger 1-like.
   
 
0.564
ENSPRNP00000000207
Solute carrier family 8 member 1a.
   
 
0.563
LOC114444414
Sodium/calcium exchanger 2-like.
   
 
0.563
slc8a1
Solute carrier family 8 member A1.
   
 
0.563
LOC114446665
Sodium/calcium exchanger 2-like.
   
 
0.563
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.