STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114442964Uncharacterized LOC114442964. (1075 aa)    
Predicted Functional Partners:
LOC114451148
Uncharacterized LOC114451148.
  
     0.487
tcf20
Transcription factor 20.
  
     0.485
LOC114445633
Uncharacterized LOC114445633.
  
     0.484
ENSPRNP00000046335
annotation not available
  
     0.460
LOC114432607
Uncharacterized LOC114432607.
  
     0.455
LOC114440611
Uncharacterized LOC114440611.
  
     0.443
LOC114441553
Amphiregulin-like.
  
     0.422
gas2l1
Growth arrest specific 2 like 1.
  
     0.421
LOC114446980
Serine-rich coiled-coil domain-containing protein 2-like.
  
     0.421
LOC114435710
RNA-binding protein 6-like.
  
     0.416
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.