STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsnRabenosyn, RAB effector. (773 aa)    
Predicted Functional Partners:
vps45
Vacuolar protein sorting 45 homolog.
    
 0.996
LOC114445329
Ras-related protein Rab-4B.
    
 0.982
rab4a
RAB4A, member RAS oncogene family.
    
 0.982
LOC114442669
EH domain-containing protein 1-like.
    
 0.950
LOC114428684
EH domain-containing protein 3.
    
 0.944
rab5c
RAB5C, member RAS oncogene family.
   
 0.919
LOC114452577
Ras-related protein Rab-5C-like.
   
 0.919
LOC114426789
Ras-related protein Rab-5B-like.
   
 0.919
LOC114448191
Ras-related protein Rab-5A.
   
 0.919
RAB17
RAB17, member RAS oncogene family.
   
 0.919
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.