STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
drg1Developmentally regulated GTP binding protein 1. (376 aa)    
Predicted Functional Partners:
zc3h15
Zinc finger CCCH-type containing 15.
   
 
 0.997
rwdd1
RWD domain containing 1.
   
 
 0.970
rps3
Ribosomal protein S3.
   
   0.919
mrps7
Mitochondrial ribosomal protein S7.
   
 
 0.919
rpl8
Ribosomal protein L8.
   
 
 0.916
rplp0
Ribosomal protein lateral stalk subunit P0.
  
 
 0.915
pole2
DNA polymerase epsilon 2, accessory subunit.
    
 
 0.899
rwdd4
RWD domain containing 4.
   
 
 0.897
rell1
RELT like 1.
   
 
 0.897
c6hxorf56
Chromosome 6 CXorf56 homolog.
    
   0.893
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.