STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
b3gnt9UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9. (470 aa)    
Predicted Functional Partners:
LOC114435580
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 7-like.
     
 0.738
c1galt1c1
C1GALT1 specific chaperone 1.
    
 0.735
LOC114453488
Beta-1,4-galactosyltransferase 1-like.
   
 
 0.735
LOC114437296
beta-1,3-N-acetylglucosaminyltransferase radical fringe-like.
    
 0.718
A3GALT2
Alpha-1,3-galactosyltransferase 2-like.
   
 
 0.716
LOC114440462
beta-1,3-N-acetylglucosaminyltransferase lunatic fringe-like.
    
 0.712
galnt2
Polypeptide N-acetylgalactosaminyltransferase 2.
     
 0.681
galnt11
Polypeptide N-acetylgalactosaminyltransferase 11.
     
 0.679
galnt7
Polypeptide N-acetylgalactosaminyltransferase 7.
    
  0.677
GALNT15
Polypeptide N-acetylgalactosaminyltransferase 15.
     
 0.670
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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