STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM19Transmembrane protein 19. (335 aa)    
Predicted Functional Partners:
srpra
SRP receptor subunit alpha.
    
  0.695
bscl2
BSCL2 lipid droplet biogenesis associated, seipin.
    
   0.641
LOC114442517
Seipin-like.
    
   0.641
rmdn1
Regulator of microtubule dynamics 1.
  
 
  0.608
LOC114443139
LRRN4 C-terminal-like protein.
    
   0.589
rmdn2
Regulator of microtubule dynamics 2.
  
 
  0.585
lclat1
Lysocardiolipin acyltransferase 1.
  
 
  0.585
agpat4
1-acylglycerol-3-phosphate O-acyltransferase 4.
  
 
  0.582
LOC114429173
Regulator of microtubule dynamics protein 3-like.
  
 
  0.582
agpat3
1-acylglycerol-3-phosphate O-acyltransferase 3.
  
 
  0.582
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.