STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
b4galt6Beta-1,4-galactosyltransferase 6. (386 aa)    
Predicted Functional Partners:
A3GALT2
Alpha-1,3-galactosyltransferase 2-like.
     
 0.891
ugcg
UDP-glucose ceramide glucosyltransferase.
     
 0.888
st3gal5
ST3 beta-galactoside alpha-2,3-sialyltransferase 5.
     
 0.869
ENSPRNP00000011159
UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 4.
   
 
 0.868
ENSPRNP00000015014
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 10 (putative).
   
 
 0.868
fut8
Fucosyltransferase 8.
     
 0.860
LOC114434287
Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A-like.
   
 
 0.852
LOC114450379
Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A-like.
   
 
 0.852
ENSPRNP00000007624
annotation not available
     
 0.847
gba2
Glucosylceramidase beta 2.
     
 0.846
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.