STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tpra1Transmembrane protein adipocyte associated 1. (390 aa)    
Predicted Functional Partners:
trpa1
Transient receptor potential cation channel subfamily A member 1.
      
 0.533
rspry1
Ring finger and SPRY domain containing 1.
      
 0.531
nudt13
Nudix hydrolase 13.
      
 0.497
zc3h15
Zinc finger CCCH-type containing 15.
      
 0.491
LOC114449516
Coiled-coil domain-containing protein 106-like.
      
 0.483
fbxo9
F-box protein 9.
      
 0.479
fam43a
Family with sequence similarity 43 member A.
      
 0.456
nudt12
Nudix hydrolase 12.
      
 0.428
gpr161
G protein-coupled receptor 161.
      
 0.414
LOC114435978
Diphosphoinositol polyphosphate phosphohydrolase 1.
   
  
 0.410
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.