STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000011107annotation not available (244 aa)    
Predicted Functional Partners:
sarnp
SAP domain containing ribonucleoprotein.
    
 0.918
poldip3
DNA polymerase delta interacting protein 3.
     
 0.870
zc3h13
Zinc finger CCCH-type containing 13.
   
 0.839
thoc5
THO complex 5.
    
 0.827
thoc2
THO complex 2.
   
 0.820
thoc1
THO complex 1.
    
 0.808
chtop
Chromatin target of PRMT1.
    
 0.793
LOC114432672
Histone-lysine N-methyltransferase ASH1L-like.
   
  
 0.791
thoc7
THO complex 7.
    
 0.784
casc3
CASC3 exon junction complex subunit.
     
 0.781
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.