STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000011194Tubulin, gamma complex associated protein 4. (352 aa)    
Predicted Functional Partners:
tubgcp3
Tubulin gamma complex associated protein 3.
   
0.998
tubgcp5
Tubulin gamma complex associated protein 5.
    
 0.998
tubgcp2
Tubulin gamma complex associated protein 2.
    
 0.998
tubgcp6
Tubulin gamma complex associated protein 6.
   
 0.998
tubg1
Tubulin gamma 1.
    
 0.997
mzt1
Mitotic spindle organizing protein 1.
    
 0.997
tubd1
Tubulin delta 1.
    
 0.991
LOC114443896
Mitotic-spindle organizing protein 2-like.
    
 0.979
dnmt1
DNA methyltransferase 1.
    
 0.922
LOC114438097
Pentatricopeptide repeat-containing protein 1, mitochondrial-like.
    
 0.922
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.