STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114448620Allograft inflammatory factor 1-like. (147 aa)    
Predicted Functional Partners:
ENSPRNP00000011739
annotation not available
   
  
 0.903
LOC114447795
Peripheral plasma membrane protein CASK-like.
    
 0.833
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.833
myo3b
Myosin IIIB.
   
 0.771
ENSPRNP00000044580
annotation not available
   
 0.771
ENSPRNP00000044586
annotation not available
   
 0.771
ENSPRNP00000044587
annotation not available
   
 0.771
fcer1g
Fc fragment of IgE receptor Ig.
   
  
 0.746
ENSPRNP00000054696
annotation not available
   
  
 0.746
ENSPRNP00000012361
annotation not available
    
 0.685
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.