STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114426210Major histocompatibility complex class I-related gene protein-like. (332 aa)    
Predicted Functional Partners:
LOC114432317
Replication protein A 32 kDa subunit-like.
   
  0.727
rpa2
Replication protein A2.
   
  0.727
LOC114432446
Beta-2-microglobulin-like.
   
  0.727
LOC114432445
Beta-2-microglobulin-like.
   
  0.723
stn1
STN1 subunit of CST complex.
   
  0.694
sass6
SAS-6 centriolar assembly protein.
   
  0.694
ENSPRNP00000046551
annotation not available
    
  0.674
LOC114435659
Uncharacterized LOC114435659.
   
 0.671
ENSPRNP00000046482
annotation not available
    
  0.639
ENSPRNP00000046483
annotation not available
    
  0.639
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.