STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114437611Transmembrane protein 17B-like. (184 aa)    
Predicted Functional Partners:
b9d1
B9 domain containing 1.
    
 0.967
cc2d2a
Coiled-coil and C2 domain containing 2A.
    
 0.967
tmem231
Transmembrane protein 231.
    
 0.964
b9d2
B9 domain containing 2.
    
 0.963
tmem107
Transmembrane protein 107.
     
 0.958
tctn2
Tectonic family member 2.
     
 0.950
mks1
MKS transition zone complex subunit 1.
     
 0.947
cep290
Centrosomal protein 290.
     
 0.931
ENSPRNP00000015811
annotation not available
     
 0.918
ahi1
Abelson helper integration site 1.
     
 0.911
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.