Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC114442450 | emc1 | ENSPRNP00000007932 | ENSPRNP00000008130 | Cytochrome c oxidase assembly protein COX18, mitochondrial. | ER membrane protein complex subunit 1. | 0.476 |
LOC114442450 | mrpl40 | ENSPRNP00000007932 | ENSPRNP00000053384 | Cytochrome c oxidase assembly protein COX18, mitochondrial. | Mitochondrial ribosomal protein L40. | 0.651 |
LOC114442450 | tango2 | ENSPRNP00000007932 | ENSPRNP00000012286 | Cytochrome c oxidase assembly protein COX18, mitochondrial. | Transport and golgi organization 2 homolog. | 0.485 |
LOC114442450 | tomm22 | ENSPRNP00000007932 | ENSPRNP00000041632 | Cytochrome c oxidase assembly protein COX18, mitochondrial. | Translocase of outer mitochondrial membrane 22. | 0.586 |
LOC114442450 | ube2w | ENSPRNP00000007932 | ENSPRNP00000045814 | Cytochrome c oxidase assembly protein COX18, mitochondrial. | Ubiquitin conjugating enzyme E2 W. | 0.414 |
LOC114442450 | vps37c | ENSPRNP00000007932 | ENSPRNP00000000221 | Cytochrome c oxidase assembly protein COX18, mitochondrial. | VPS37C subunit of ESCRT-I. | 0.433 |
emc1 | LOC114442450 | ENSPRNP00000008130 | ENSPRNP00000007932 | ER membrane protein complex subunit 1. | Cytochrome c oxidase assembly protein COX18, mitochondrial. | 0.476 |
emc1 | tango2 | ENSPRNP00000008130 | ENSPRNP00000012286 | ER membrane protein complex subunit 1. | Transport and golgi organization 2 homolog. | 0.412 |
lin37 | mcm3ap | ENSPRNP00000018089 | ENSPRNP00000044932 | Lin-37 DREAM MuvB core complex component. | Minichromosome maintenance complex component 3 associated protein. | 0.513 |
lin37 | tango2 | ENSPRNP00000018089 | ENSPRNP00000012286 | Lin-37 DREAM MuvB core complex component. | Transport and golgi organization 2 homolog. | 0.448 |
mcm3ap | lin37 | ENSPRNP00000044932 | ENSPRNP00000018089 | Minichromosome maintenance complex component 3 associated protein. | Lin-37 DREAM MuvB core complex component. | 0.513 |
mcm3ap | tango2 | ENSPRNP00000044932 | ENSPRNP00000012286 | Minichromosome maintenance complex component 3 associated protein. | Transport and golgi organization 2 homolog. | 0.483 |
mrpl40 | LOC114442450 | ENSPRNP00000053384 | ENSPRNP00000007932 | Mitochondrial ribosomal protein L40. | Cytochrome c oxidase assembly protein COX18, mitochondrial. | 0.651 |
mrpl40 | tango2 | ENSPRNP00000053384 | ENSPRNP00000012286 | Mitochondrial ribosomal protein L40. | Transport and golgi organization 2 homolog. | 0.582 |
mrpl40 | txnrd2 | ENSPRNP00000053384 | ENSPRNP00000016769 | Mitochondrial ribosomal protein L40. | Thioredoxin reductase 2. | 0.459 |
mrpl40 | ufd1 | ENSPRNP00000053384 | ENSPRNP00000002352 | Mitochondrial ribosomal protein L40. | Ubiquitin recognition factor in ER associated degradation 1. | 0.532 |
tango2 | LOC114442450 | ENSPRNP00000012286 | ENSPRNP00000007932 | Transport and golgi organization 2 homolog. | Cytochrome c oxidase assembly protein COX18, mitochondrial. | 0.485 |
tango2 | emc1 | ENSPRNP00000012286 | ENSPRNP00000008130 | Transport and golgi organization 2 homolog. | ER membrane protein complex subunit 1. | 0.412 |
tango2 | lin37 | ENSPRNP00000012286 | ENSPRNP00000018089 | Transport and golgi organization 2 homolog. | Lin-37 DREAM MuvB core complex component. | 0.448 |
tango2 | mcm3ap | ENSPRNP00000012286 | ENSPRNP00000044932 | Transport and golgi organization 2 homolog. | Minichromosome maintenance complex component 3 associated protein. | 0.483 |
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