STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114434210Calpain-2 catalytic subunit-like. (743 aa)    
Predicted Functional Partners:
cast
Calpastatin.
   
 0.883
LOC114451975
Talin-2-like.
    
 0.857
LOC114443648
Talin-1.
    
 0.857
LOC114433104
Talin-2.
    
 0.857
LOC114436620
Calpain-2 catalytic subunit-like.
  
  
 
0.834
ENSPRNP00000031182
Zgc:153993.
   
  0.833
CAPNS1
Calpain small subunit 1-like.
   
0.784
LOC114446416
Calpain small subunit 1-like.
   
0.784
BAX
Apoptosis regulator BAX-like.
    
  0.757
LOC114440469
Apoptosis regulator BAX-like.
    
  0.757
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.