STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fam78aFamily with sequence similarity 78 member A. (262 aa)    
Predicted Functional Partners:
LOC114448986
Cytochrome b5 reductase 4.
   
 0.838
gusb
Glucuronidase beta.
   
 0.764
LOC114450645
UDP-glucuronosyltransferase 2C1-like.
     
 0.715
ENSPRNP00000022983
UDP glucuronosyltransferase 5 family, polypeptide E1.
     
 0.714
ENSPRNP00000026742
Neurexin 2a.
    
 0.705
NRXN2
Neurexin 2.
    
 0.705
ENSPRNP00000026765
annotation not available
    
 0.705
ENSPRNP00000026770
annotation not available
    
 0.705
ENSPRNP00000026773
annotation not available
    
 0.705
LOC114427092
Neurexin-3a.
    
 0.705
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.