STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnlzDNL-type zinc finger. (196 aa)    
Predicted Functional Partners:
hspa9
Heat shock protein family A (Hsp70) member 9.
    
 0.944
pikfyve
Phosphoinositide kinase, FYVE-type zinc finger containing.
     
 0.672
grpel1
GrpE like 1, mitochondrial.
     
 0.605
timm13
Translocase of inner mitochondrial membrane 13.
   
  
 0.560
timm50
Translocase of inner mitochondrial membrane 50.
   
 
 0.552
cdpf1
Cysteine rich DPF motif domain containing 1.
      
 0.533
LOC114449249
Mitochondrial import inner membrane translocase subunit TIM44-like.
   
 
 0.530
timm44
Translocase of inner mitochondrial membrane 44.
   
 
 0.530
pign
Phosphatidylinositol glycan anchor biosynthesis class N.
      
 0.527
timm17a
Translocase of inner mitochondrial membrane 17A.
   
 
 0.514
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.