STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114436051Cysteine and glycine-rich protein 1-like. (192 aa)    
Predicted Functional Partners:
LOC114450656
Serine/threonine-protein kinase 4-like.
    
 0.674
LOC114430326
Serine/threonine-protein kinase 3.
    
 0.674
LOC114426301
Myosin light chain 1, skeletal muscle isoform.
   
  
 0.495
actn3
Actinin alpha 3.
   
 0.457
ACTN4
Alpha-actinin-4-like.
   
 0.457
LOC114447221
Alpha-actinin-2.
   
 0.457
LOC114427592
Alpha-actinin-1.
   
 0.457
faap24
FA core complex associated protein 24.
     
 0.445
LOC114436060
Myosin regulatory light polypeptide 9.
   
    0.439
LOC114449874
Myosin regulatory light chain 2, smooth muscle minor isoform-like.
   
    0.439
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.