STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptpn5Protein tyrosine phosphatase non-receptor type 5. (441 aa)    
Predicted Functional Partners:
ptpn7
Protein tyrosine phosphatase non-receptor type 7.
  
 
 
0.873
ptprr
Protein tyrosine phosphatase receptor type R.
    
 
0.870
DUSP3
Dual specificity phosphatase 3.
    
  0.850
DUSP3-2
Dual specificity phosphatase 3.
    
  0.850
LOC114438777
Mitogen-activated protein kinase 13-like.
    
  0.849
mapk10
Mitogen-activated protein kinase 10.
    
  0.849
LOC114442166
Mitogen-activated protein kinase 9-like.
    
  0.849
LOC114447153
Mitogen-activated protein kinase 11-like.
    
  0.849
LOC114439726
Mitogen-activated protein kinase 1-like.
    
  0.847
LOC114437077
Mitogen-activated protein kinase 8.
    
  0.847
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.