STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114428781Adenylate cyclase type 8-like. (1180 aa)    
Predicted Functional Partners:
ENSPRNP00000027936
annotation not available
    
 0.843
ENSPRNP00000027937
annotation not available
    
 0.843
CALML6
Calmodulin-like protein 6.
   
 0.840
pde3b
Phosphodiesterase 3B.
    
 0.836
pde7a
Phosphodiesterase 7A.
    
 0.834
PDE7B
Phosphodiesterase 7B.
    
 0.834
LOC114435487
Guanine nucleotide-binding protein G(i) subunit alpha-2-like.
   
 0.825
LOC114435721
Guanine nucleotide-binding protein G(i) subunit alpha-2.
   
 0.825
LOC114438068
Guanine nucleotide-binding protein G(k) subunit alpha-like.
   
 0.825
pde6c
Phosphodiesterase 6C.
   
 0.824
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.