STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdt1Chromatin licensing and DNA replication factor 1. (413 aa)    
Predicted Functional Partners:
orc4
Origin recognition complex subunit 4.
   
 0.999
LOC114434695
Origin recognition complex subunit 1-like.
   
 0.999
gmnn
Geminin DNA replication inhibitor.
   
 0.999
mcm3
Minichromosome maintenance complex component 3.
   
 0.999
mcm7
Minichromosome maintenance complex component 7.
   
 0.999
mcm5
Minichromosome maintenance complex component 5.
   
 0.999
orc3
Origin recognition complex subunit 3.
    
 0.999
mcm6
Minichromosome maintenance complex component 6.
   
 0.999
orc2
Origin recognition complex subunit 2.
   
 0.999
cdc6
Cell division cycle 6.
   
 0.999
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.