STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000019096Leucine-rich repeats and calponin homology (CH) domain containing 3. (296 aa)    
Predicted Functional Partners:
ENSPRNP00000019094
annotation not available
 
      0.878
ENSPRNP00000006976
Netrin g1a.
    
 0.745
ENSPRNP00000055352
Vav 3 guanine nucleotide exchange factor b.
    
 0.745
ENSPRNP00000005003
annotation not available
   
  0.717
ENSPRNP00000005061
annotation not available
   
  0.717
ENSPRNP00000017048
annotation not available
   
  0.717
LOC114432604
Adhesion G protein-coupled receptor L1-like.
   
  0.717
LOC114449530
Adhesion G protein-coupled receptor L2-like.
   
  0.717
LOC114431992
Adhesion G protein-coupled receptor L3-like.
   
  0.717
adgrl1
Adhesion G protein-coupled receptor L1.
   
  0.717
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.