STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpl1Mitochondrial ribosomal protein L1. (350 aa)    
Predicted Functional Partners:
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
 0.999
mrpl11
Mitochondrial ribosomal protein L11.
  
 
 0.998
rpl11
Ribosomal protein L11.
  
 0.997
mrpl22
Mitochondrial ribosomal protein L22.
  
 0.997
rpl31
Ribosomal protein L31.
  
 0.997
RPL32
Ribosomal protein L32.
   
 0.997
mrpl4
Mitochondrial ribosomal protein L4.
  
 0.997
rpl18a
Ribosomal protein L18a.
  
 0.997
mrpl2
Mitochondrial ribosomal protein L2.
  
 0.997
rps28
Ribosomal protein S28.
   
 0.997
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.