STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tdrkhTudor and KH domain containing. (640 aa)    
Predicted Functional Partners:
piwil1
Piwi like RNA-mediated gene silencing 1.
   
 0.911
piwil2
Piwi like RNA-mediated gene silencing 2.
   
 0.900
tdrd9
Tudor domain containing 9.
    
0.769
prkar2a
Protein kinase cAMP-dependent type II regulatory subunit alpha.
    
 0.730
LOC114437945
cAMP-dependent protein kinase type II-alpha regulatory subunit-like.
    
 0.730
LOC114451393
cAMP-dependent protein kinase type II-beta regulatory subunit-like.
    
 0.730
prkar1b
Protein kinase cAMP-dependent type I regulatory subunit beta.
    
 0.730
prkar1a
Protein kinase cAMP-dependent type I regulatory subunit alpha.
    
 0.730
snd1
Staphylococcal nuclease and tudor domain containing 1.
   
 0.714
ENSPRNP00000002113
Si:ch73-130a3.4.
    
 0.688
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.