STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114432604Adhesion G protein-coupled receptor L1-like. (1234 aa)    
Predicted Functional Partners:
LOC114444119
Netrin receptor UNC5D-like.
   
 
 0.993
unc5d
Unc-5 netrin receptor D.
   
 
 0.993
unc5c
Unc-5 netrin receptor C.
   
 
 0.993
unc5a
Unc-5 netrin receptor A.
   
 
 0.993
LOC114443558
Netrin receptor UNC5C-like.
   
 
 0.993
LOC114436388
SUZ domain-containing protein 1-like.
    
 
 0.963
LOC114432341
Vascular endothelial growth factor C-like.
    
 
 0.963
LOC114442562
Teneurin-3-like.
    
 
 0.963
tenm4
Teneurin transmembrane protein 4.
    
 
 0.963
ENSPRNP00000025533
annotation not available
    
 
 0.963
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.