STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114438420Myosin-binding protein H-like. (560 aa)    
Predicted Functional Partners:
arid4a
AT-rich interaction domain 4A.
    
 0.912
ENSPRNP00000027756
Translocase of outer mitochondrial membrane 20.
    
 0.912
mysm1
Myb like, SWIRM and MPN domains 1.
    
 0.885
actl6a
Actin like 6A.
    
 0.833
arpc3
Actin related protein 2/3 complex subunit 3.
   
 0.826
dctn2
Dynactin subunit 2.
    
 0.826
dctn4
Dynactin subunit 4.
    
 0.821
dctn5
Dynactin subunit 5.
    
 0.821
capzb
Capping actin protein of muscle Z-line subunit beta.
   
 0.795
LOC114437522
Actin-related protein 2/3 complex subunit 1B-B-like.
   
 0.789
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.