STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kiaa0100KIAA0100 ortholog. (2249 aa)    
Predicted Functional Partners:
mtif2
Mitochondrial translational initiation factor 2.
   
 0.879
mrps35
Mitochondrial ribosomal protein S35.
   
 0.781
ptcd3
Pentatricopeptide repeat domain 3.
    
 0.774
eif5b
Eukaryotic translation initiation factor 5B.
   
 0.769
mrps31
Mitochondrial ribosomal protein S31.
   
 0.764
mrps18b
Mitochondrial ribosomal protein S18B.
   
 0.750
dap3
Death associated protein 3.
    
 0.746
mrps9
Mitochondrial ribosomal protein S9.
    
 0.735
mrps22
Mitochondrial ribosomal protein S22.
    
 0.727
chchd1
Coiled-coil-helix-coiled-coil-helix domain containing 1.
    
 0.724
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.