STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdcd10Programmed cell death 10. (210 aa)    
Predicted Functional Partners:
LOC114426690-2
MOB-like protein phocein.
   
 0.980
fgfr1op2
FGFR1 oncogene partner 2.
    
 0.976
LOC114444787
Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform.
    
 0.963
LOC114436085
CTTNBP2 N-terminal-like protein.
    
 0.950
cttnbp2nl
CTTNBP2 N-terminal like.
    
 0.950
ccm2
CCM2 scaffold protein.
    
 
 0.942
slmap
Sarcolemma associated protein.
    
 
 0.929
strip2
Striatin interacting protein 2.
    
 0.917
strip1
Striatin interacting protein 1.
    
 0.917
LOC114438507
TRAF3-interacting JNK-activating modulator-like.
    
 
 0.916
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.