STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114428559Hydroperoxide isomerase ALOXE3-like. (661 aa)    
Predicted Functional Partners:
LOC114436277
Cytochrome P450 2U1.
    
  0.846
ptgs2
Prostaglandin-endoperoxide synthase 2.
   
 
 0.841
ENSPRNP00000048676
Glutathione peroxidase 9.
   
 
  0.834
PLA2G12B
Group XIIB secretory phospholipase A2-like protein.
    
 0.798
LOC114448388
Cytochrome P450 4B1-like.
   
 0.779
pla2g12a
Phospholipase A2 group XIIA.
    
  0.777
ENSPRNP00000023013
annotation not available
    
  0.776
pla2g4a
Phospholipase A2 group IVA.
   
 
 0.776
LOC114433667
Arachidonate 12-lipoxygenase, 12R-type-like.
  
  
 
0.763
ENSPRNP00000009467
Glutathione peroxidase 3.
   
 
  0.760
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.