STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctsoCathepsin O. (340 aa)    
Predicted Functional Partners:
ctsc
Cathepsin C.
   
0.873
ctsb
Cathepsin B.
  
0.863
LOC114433279
Cathepsin B-like.
  
0.862
LOC114442957
Cathepsin F-like.
  
  
 
0.842
LOC114438699
Baculoviral IAP repeat-containing protein 5.1-A-like.
     
 0.835
LOC114445779
Baculoviral IAP repeat-containing protein 2-like.
     
 0.835
LOC114452309
Baculoviral IAP repeat-containing protein 5.2-like.
     
 0.835
LOC114442497
E3 ubiquitin-protein ligase XIAP-like.
     
 0.835
bcl2l1
BCL2 like 1.
     
 0.834
LOC114436115
Bcl-2-like protein 1.
     
 0.834
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.