STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114440522Probable ATP-dependent RNA helicase DDX17. (602 aa)    
Predicted Functional Partners:
pes1
Pescadillo ribosomal biogenesis factor 1.
   
 0.946
gtpbp4
GTP binding protein 4.
   
 0.930
cep152
Centrosomal protein 152.
   
 0.927
drosha
Drosha ribonuclease III.
  
 0.925
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
 0.924
wdr12
WD repeat domain 12.
   
 0.921
ddx18
DEAD-box helicase 18.
  
0.914
sf3b1
Splicing factor 3b subunit 1.
   
 0.908
nsa2
NSA2 ribosome biogenesis factor.
   
 0.903
LOC114444907
WD repeat-containing protein 74-like.
   
 0.897
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.