STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114431612F-actin-uncapping protein LRRC16A-like. (1448 aa)    
Predicted Functional Partners:
capzb
Capping actin protein of muscle Z-line subunit beta.
    
 0.959
LOC114439005
F-actin-capping protein subunit alpha-1-like.
    
 0.890
CAPZA2
Capping actin protein of muscle Z-line subunit alpha 2.
    
 0.890
LOC114436766
F-actin-capping protein subunit alpha-1.
    
 0.890
LOC114437838
Uncharacterized LOC114437838.
    
 0.884
myo1b
Myosin IB.
     
 0.840
myo1c
Myosin IC.
     
 0.747
LOC114445704
Unconventional myosin-Ic-like.
     
 0.747
LOC114448732
SH3 domain-containing kinase-binding protein 1-like.
    
 0.657
sh3kbp1
SH3 domain containing kinase binding protein 1.
    
 0.657
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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