STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114451781Protein LSM14 homolog A-like. (466 aa)    
Predicted Functional Partners:
EIF4ENIF1
Eukaryotic translation initiation factor 4E nuclear import factor 1.
   
 0.971
LOC114453265
Probable ATP-dependent RNA helicase ddx6.
   
 0.922
LOC114448120
Probable ATP-dependent RNA helicase ddx6.
   
 0.922
ddx6
DEAD-box helicase 6.
   
 0.922
cpeb1
Cytoplasmic polyadenylation element binding protein 1.
   
 0.895
cpeb2
Cytoplasmic polyadenylation element binding protein 2.
   
 0.852
dcp2
Decapping mRNA 2.
    
 
 0.811
LOC114437789
Enhancer of mRNA-decapping protein 3-like.
    
 
 0.784
edc3
Enhancer of mRNA decapping 3.
    
 
 0.784
dcp1a
Decapping mRNA 1A.
    
 
 0.781
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.