STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114442231Transcriptional regulator ATRX homolog. (563 aa)    
Predicted Functional Partners:
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
  0.969
fras1
Fraser extracellular matrix complex subunit 1.
    
 0.791
rps21
Ribosomal protein S21.
   
  0.693
rps28
Ribosomal protein S28.
   
  0.692
rps15
Ribosomal protein S15.
   
  0.692
rps11
Ribosomal protein S11.
   
 0.683
LOC114447785
Tumor necrosis factor receptor superfamily member 6-like.
    
 0.661
rps24
Ribosomal protein S24.
   
 0.660
rps3a
Ribosomal protein S3A.
   
  0.655
rps7
Ribosomal protein S7.
   
  0.653
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.