STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114444446Septin-4-like. (445 aa)    
Predicted Functional Partners:
LOC114442497
E3 ubiquitin-protein ligase XIAP-like.
    
 0.925
septin10
Septin 10.
  
0.917
LOC114445779
Baculoviral IAP repeat-containing protein 2-like.
    
  0.884
LOC114438699
Baculoviral IAP repeat-containing protein 5.1-A-like.
    
  0.877
LOC114452309
Baculoviral IAP repeat-containing protein 5.2-like.
    
  0.877
LOC114445712
septin-8-A.
  
0.871
LOC114442190
septin-8-A-like.
  
0.871
septin6
Septin 6.
  
0.871
prkn
Parkin RBR E3 ubiquitin protein ligase.
    
 0.866
LOC114445784
Septin-5-like.
  
  
 
0.837
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.