STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000027061Protein tyrosine phosphatase receptor type N2. (678 aa)    
Predicted Functional Partners:
lrit3
Leucine rich repeat, Ig-like and transmembrane domains 3.
    
  0.644
ENSPRNP00000033325
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 3b.
    
  0.644
LOC114447475
Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1.
    
  0.644
lrit1
Leucine rich repeat, Ig-like and transmembrane domains 1.
    
  0.644
svep1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
  0.641
tnr
Tenascin R.
   
  0.640
ENSPRNP00000000478
annotation not available
    
  0.637
tnn
Tenascin N.
    
  0.637
tnc
Tenascin C.
    
  0.637
LOC114441866
Tenascin-like.
    
  0.637
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.