STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114451109Structure-specific endonuclease subunit slx1-like. (262 aa)    
Predicted Functional Partners:
ENSPRNP00000012888
annotation not available
   
 0.995
ARPC4
Actin-related protein 2/3 complex subunit 4-like.
    
 0.988
nars1
asparaginyl-tRNA synthetase 1.
   
 0.988
LOC114435426
Actin-related protein 2/3 complex subunit 4.
    
 0.988
blm
BLM RecQ like helicase.
    
 0.981
nars2
asparaginyl-tRNA synthetase 2, mitochondrial.
   
 0.953
dars1
aspartyl-tRNA synthetase 1.
   
 0.953
recql5
RecQ like helicase 5.
    
 0.950
mus81
MUS81 structure-specific endonuclease subunit.
   
 0.930
ercc4
ERCC excision repair 4, endonuclease catalytic subunit.
   
 0.927
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.