STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114432204Forkhead box protein J1-A-like. (401 aa)    
Predicted Functional Partners:
suox
Sulfite oxidase.
     
 0.732
sgk3
Serum/glucocorticoid regulated kinase family member 3.
    
 0.676
LOC114441944
Transmembrane emp24 domain-containing protein 7-like.
    
  0.644
LOC114450351
TIR domain-containing adapter molecule 1-like.
    
  0.644
sirt1
Sirtuin 1.
    
 0.634
sirt5
Sirtuin 5.
    
 0.634
LOC114450352
NAD-dependent protein deacylase sirtuin-5, mitochondrial-like.
    
 0.634
LOC114439673
Histone acetyltransferase p300-like.
    
 0.614
LOC114432586
CREB-binding protein-like.
    
 0.614
LOC114437792
Histone acetyltransferase p300-like.
    
 0.614
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.