STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114443640Metal transporter CNNM4-like. (926 aa)    
Predicted Functional Partners:
gmps
Guanine monophosphate synthase.
  
 
 0.816
atic
5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase.
    
 0.772
itpa
Inosine triphosphatase.
    
  0.715
LOC114448685
Protein tyrosine phosphatase type IVA 3.
    
 
 0.696
LOC114428432
5'-nucleotidase-like.
    
 0.691
NT5E
5'-nucleotidase ecto.
    
 0.691
LOC114450971
Protein tyrosine phosphatase type IVA 2.
    
 
 0.685
aprt
Adenine phosphoribosyltransferase.
  
 
 0.634
LOC114444492
Adenine phosphoribosyltransferase-like.
  
 
 0.634
adss1
Adenylosuccinate synthase 1.
  
 
 0.629
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.