STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
epb41l5Erythrocyte membrane protein band 4.1 like 5. (741 aa)    
Predicted Functional Partners:
prkci
Protein kinase C iota.
    
 0.855
LOC114449371
Rho guanine nucleotide exchange factor 18-like.
     
 0.800
LOC114447795
Peripheral plasma membrane protein CASK-like.
   
 0.784
CASK
Calcium/calmodulin dependent serine protein kinase.
   
 0.784
prkcz
Protein kinase C zeta.
    
 0.768
mpp1
Membrane palmitoylated protein 1.
    
 0.641
MPP5
MAGUK p55 subfamily member 5-A-like.
    
 0.635
mpp5
Membrane palmitoylated protein 5.
    
 0.635
mib1
Mindbomb E3 ubiquitin protein ligase 1.
    
 
 0.589
MPP6
MAGUK p55 subfamily member 6-like.
    
 0.576
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.