STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114439105TNF receptor-associated factor 5-like. (579 aa)    
Predicted Functional Partners:
traf6
TNF receptor associated factor 6.
   
0.982
tank
TRAF family member associated NFKB activator.
    
 0.976
ENSPRNP00000041757
TANK-binding kinase 1.
   
 0.971
tradd
TNFRSF1A associated via death domain.
    
 0.968
ikbke
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
   
 0.966
LOC114447934
Tumor necrosis factor receptor superfamily member 5-like.
    
 0.965
tnfrsf1a
TNF receptor superfamily member 1A.
    
 0.936
ripk1
Receptor interacting serine/threonine kinase 1.
   
 0.929
ENSPRNP00000042761
annotation not available
   
 0.924
ripk2
Receptor interacting serine/threonine kinase 2.
   
 0.922
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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