STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rps15aRibosomal protein S15a. (130 aa)    
Predicted Functional Partners:
rps5
Ribosomal protein S5.
  
 0.999
rps18
Ribosomal protein S18.
  
 0.999
RPS20
Ribosomal protein S20.
  
 0.999
rps11
Ribosomal protein S11.
  
 0.999
rps3
Ribosomal protein S3.
  
 0.999
rps9
Ribosomal protein S9.
  
 0.999
rps3a
Ribosomal protein S3A.
  
 0.999
rps16
Ribosomal protein S16.
  
 0.999
pdcd11
Programmed cell death 11.
  
 0.999
RPS29
Ribosomal protein S29.
  
 0.999
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.