STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABHD5Abhydrolase domain containing 5. (394 aa)    
Predicted Functional Partners:
ENSPRNP00000021723
annotation not available
    
 0.902
crls1
Cardiolipin synthase 1.
    
 0.853
pnpla2
Patatin like phospholipase domain containing 2.
    
 0.845
LOC114430607
Patatin-like phospholipase domain-containing protein 2.
    
 0.845
ndufab1
NADH:ubiquinone oxidoreductase subunit AB1.
  
 0.836
ENSPRNP00000034389
annotation not available
  
 0.836
LOC114452561
Patatin-like phospholipase domain-containing protein 2.
    
 0.786
ENSPRNP00000002947
annotation not available
    
 0.774
ENSPRNP00000047759
annotation not available
    
 0.772
aasdh
Aminoadipate-semialdehyde dehydrogenase.
    
 0.748
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.