STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hexdHexosaminidase D. (480 aa)    
Predicted Functional Partners:
hexa
Hexosaminidase subunit alpha.
     
 0.904
hexb
Hexosaminidase subunit beta.
     
 0.904
fam149b1
Family with sequence similarity 149 member B1.
     
 0.871
pde6g
Phosphodiesterase 6G.
   
 0.866
pla2g4a
Phospholipase A2 group IVA.
    
  0.841
hddc3
HD domain containing 3.
   
    0.782
LOC114435680
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1-like.
   
 0.753
LOC114447929
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3-like.
   
 0.753
gnb1
G protein subunit beta 1.
   
 0.753
LOC114446306
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2.
   
 0.753
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.