STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114442000ES1 protein, mitochondrial. (263 aa)    
Predicted Functional Partners:
isoc2
Isochorismatase domain containing 2.
   
  
 0.499
park7
Parkinsonism associated deglycase.
   
 
 0.458
ggnbp2
Gametogenetin binding protein 2.
    
  0.444
ldhd
Lactate dehydrogenase D.
    
  0.444
dhcr24
24-dehydrocholesterol reductase.
    
  0.444
agps
Alkylglycerone phosphate synthase.
    
  0.444
guf1
GUF1 homolog, GTPase.
      
 0.434
esd
Esterase D.
      
 0.424
nit2
Nitrilase family member 2.
   
 
 0.405
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.