STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
parnpoly(A)-specific ribonuclease. (677 aa)    
Predicted Functional Partners:
dcp2
Decapping mRNA 2.
     
 0.824
dis3l2
DIS3 like 3'-5' exoribonuclease 2.
   
 
 0.797
LOC114442397
Far upstream element-binding protein 2-like.
   
 0.784
fubp1
Far upstream element binding protein 1.
   
 0.784
exosc5
Exosome component 5.
     
 0.759
exosc6
Exosome component 6.
     
 0.734
exosc3
Exosome component 3.
     
 0.727
exosc4
Exosome component 4.
     
 0.717
dis3
DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease.
   
 
 0.716
exosc7
Exosome component 7.
     
 0.715
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.