STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rell1RELT like 1. (259 aa)    
Predicted Functional Partners:
drg2
Developmentally regulated GTP binding protein 2.
   
 
 0.941
drg1
Developmentally regulated GTP binding protein 1.
   
 
 0.897
map3k4
Mitogen-activated protein kinase kinase kinase 4.
    
   0.709
gcn1
GCN1 activator of EIF2AK4.
    
 
 0.701
zc3h15
Zinc finger CCCH-type containing 15.
   
 
 0.646
denr
Density regulated re-initiation and release factor.
   
    0.429
LOC114434512
Histamine H3 receptor-like.
    
 
 0.429
rsl24d1
Ribosomal L24 domain containing 1.
   
    0.428
bccip
BRCA2 and CDKN1A interacting protein.
   
    0.428
nifk
Nucleolar protein interacting with the FHA domain of MKI67.
   
    0.424
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.